Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp54Q8BL06 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.18■□□□□ 0.66
Usp54Q8BL06 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp54Q8BL06 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC19.17■□□□□ 0.66
Usp54Q8BL06 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC19.17■□□□□ 0.66
Usp54Q8BL06 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp54Q8BL06 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp54Q8BL06 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp54Q8BL06 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm44772-201ENSMUST00000207623 1191 ntBASIC19.15■□□□□ 0.66
Usp54Q8BL06 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 AC139054.1-201ENSMUST00000226898 1598 ntBASIC19.15■□□□□ 0.66
Usp54Q8BL06 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm10434-201ENSMUST00000101158 471 ntBASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm11439-201ENSMUST00000118598 409 ntBASIC19.15■□□□□ 0.66
Usp54Q8BL06 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp54Q8BL06 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp54Q8BL06 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp54Q8BL06 Gm23270-201ENSMUST00000104055 131 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms