Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc5a7Q8BGY9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Gm15957-201ENSMUST00000118893 974 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc5a7Q8BGY9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc5a7Q8BGY9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc5a7Q8BGY9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc5a7Q8BGY9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Slc5a7Q8BGY9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc5a7Q8BGY9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Mir7071-201ENSMUST00000184847 69 ntBASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Gm6376-201ENSMUST00000209407 580 ntBASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc5a7Q8BGY9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc5a7Q8BGY9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms