Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smndc1Q8BGT7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smndc1Q8BGT7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smndc1Q8BGT7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms