Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubp1Q811S7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.58□□□□□ -0.23
Ubp1Q811S7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm24694-201ENSMUST00000180054 110 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm27663-201ENSMUST00000184839 110 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 Thoc7-209ENSMUST00000225325 765 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm2423-201ENSMUST00000074863 733 ntBASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubp1Q811S7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm22119-201ENSMUST00000175594 99 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Syt7-205ENSMUST00000224135 1557 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.57□□□□□ -0.24
Ubp1Q811S7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubp1Q811S7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ubp1Q811S7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms