Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ttc28Q80XJ3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gm16372-201ENSMUST00000073088 450 ntBASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ttc28Q80XJ3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.46□□□□□ -0.57
Ttc28Q80XJ3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Gm8099-201ENSMUST00000200510 742 ntBASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ttc28Q80XJ3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ttc28Q80XJ3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms