Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Gm27243-201ENSMUST00000183964 521 ntBASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.86■□□□□ 0.13
Prpf40bQ80W14 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Gm8463-201ENSMUST00000208573 613 ntBASIC15.85■□□□□ 0.13
Prpf40bQ80W14 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Prpf40bQ80W14 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm29127-201ENSMUST00000188304 517 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm38241-201ENSMUST00000192641 898 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm7287-201ENSMUST00000205267 602 ntBASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.84■□□□□ 0.13
Prpf40bQ80W14 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Prpf40bQ80W14 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Prpf40bQ80W14 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Prpf40bQ80W14 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Gm5187-201ENSMUST00000117317 991 ntBASIC15.83■□□□□ 0.12
Prpf40bQ80W14 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Gm29649-201ENSMUST00000185649 419 ntBASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.83■□□□□ 0.12
Prpf40bQ80W14 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms