Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Gm13823-201ENSMUST00000119930 345 ntBASIC13.82□□□□□ -0.2
Usp8Q80U87 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Gm24513-201ENSMUST00000174964 138 ntBASIC13.82□□□□□ -0.2
Usp8Q80U87 Gm27397-201ENSMUST00000184997 107 ntBASIC13.82□□□□□ -0.2
Usp8Q80U87 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.81□□□□□ -0.2
Usp8Q80U87 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm11594-201ENSMUST00000122313 162 ntBASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 AA543401-201ENSMUST00000164248 1269 ntBASIC13.81□□□□□ -0.2
Usp8Q80U87 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm2213-201ENSMUST00000197485 688 ntBASIC13.81□□□□□ -0.2
Usp8Q80U87 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp8Q80U87 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Gm29541-201ENSMUST00000191351 678 ntBASIC13.8□□□□□ -0.2
Usp8Q80U87 Gm45453-201ENSMUST00000211758 853 ntBASIC13.8□□□□□ -0.2
Usp8Q80U87 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp8Q80U87 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp8Q80U87 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.79□□□□□ -0.2
Usp8Q80U87 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp8Q80U87 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Usp8Q80U87 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms