Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh8Q7TSK3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm15240-201ENSMUST00000118156 720 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm25857-201ENSMUST00000082788 129 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms