Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14□□□□□ -0.17
TwistnbQ78WZ7 Gm15957-201ENSMUST00000118893 974 ntBASIC14□□□□□ -0.17
TwistnbQ78WZ7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14□□□□□ -0.17
TwistnbQ78WZ7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Gm10176-201ENSMUST00000159707 2264 ntBASIC14□□□□□ -0.17
TwistnbQ78WZ7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14□□□□□ -0.17
TwistnbQ78WZ7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Gm11452-201ENSMUST00000122376 690 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TwistnbQ78WZ7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TwistnbQ78WZ7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TwistnbQ78WZ7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms