Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm11591-201ENSMUST00000120063 702 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Gm2991-201ENSMUST00000173338 480 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Gm6621-201ENSMUST00000193251 772 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx55Q6ZPL9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm15370-201ENSMUST00000117158 253 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm13297-201ENSMUST00000120205 934 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx55Q6ZPL9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms