Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timd4Q6U7R4 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm11424-201ENSMUST00000121929 829 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm28760-201ENSMUST00000185995 736 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm17795-201ENSMUST00000214505 757 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Timd4Q6U7R4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timd4Q6U7R4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timd4Q6U7R4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timd4Q6U7R4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms