Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm30285-201ENSMUST00000214614 422 ntBASIC11.56□□□□□ -0.56
Rif1Q6PR54 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.56□□□□□ -0.56
Rif1Q6PR54 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Mir3060-201ENSMUST00000175339 83 ntBASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm24420-201ENSMUST00000176676 59 ntBASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Mir181d-201ENSMUST00000102383 72 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm5687-201ENSMUST00000118252 640 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm5621-201ENSMUST00000187303 640 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.55□□□□□ -0.56
Rif1Q6PR54 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rif1Q6PR54 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms