Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gm15678-201ENSMUST00000117573 960 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gm4804-201ENSMUST00000182234 999 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gm28911-201ENSMUST00000188837 117 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Gm13829-201ENSMUST00000119600 138 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Gm37714-201ENSMUST00000194742 342 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb4Q6P8W9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Gm6266-201ENSMUST00000203844 806 ntBASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb4Q6P8W9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gm9002-201ENSMUST00000178437 499 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gm27701-201ENSMUST00000184498 110 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms