Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sdc3Q64519 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.24□□□□□ -0.29
Sdc3Q64519 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.24□□□□□ -0.29
Sdc3Q64519 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.24□□□□□ -0.29
Sdc3Q64519 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.24□□□□□ -0.29
Sdc3Q64519 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.24□□□□□ -0.29
Sdc3Q64519 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sdc3Q64519 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sdc3Q64519 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.23□□□□□ -0.29
Sdc3Q64519 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm6745-201ENSMUST00000199216 526 ntBASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm7653-201ENSMUST00000214567 508 ntBASIC13.23□□□□□ -0.29
Sdc3Q64519 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.23□□□□□ -0.29
Sdc3Q64519 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sdc3Q64519 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.23□□□□□ -0.29
Sdc3Q64519 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sdc3Q64519 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sdc3Q64519 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.22□□□□□ -0.29
Sdc3Q64519 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sdc3Q64519 Gm37917-201ENSMUST00000194711 392 ntBASIC13.22□□□□□ -0.29
Sdc3Q64519 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.22□□□□□ -0.29
Sdc3Q64519 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sdc3Q64519 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.22□□□□□ -0.29
Sdc3Q64519 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sdc3Q64519 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sdc3Q64519 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sdc3Q64519 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc3Q64519 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc3Q64519 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sdc3Q64519 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms