Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
AtmQ62388 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
AtmQ62388 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
AtmQ62388 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.73□□□□□ -0.37
AtmQ62388 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
AtmQ62388 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Acot6-202ENSMUST00000222921 3622 ntBASIC12.72□□□□□ -0.37
AtmQ62388 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
AtmQ62388 Gm11675-201ENSMUST00000121873 832 ntBASIC12.72□□□□□ -0.37
AtmQ62388 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AtmQ62388 Mir6958-201ENSMUST00000184207 73 ntBASIC12.72□□□□□ -0.37
AtmQ62388 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.72□□□□□ -0.37
AtmQ62388 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.72□□□□□ -0.37
AtmQ62388 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.72□□□□□ -0.37
AtmQ62388 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.72□□□□□ -0.37
AtmQ62388 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
AtmQ62388 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AtmQ62388 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
AtmQ62388 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
AtmQ62388 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.71□□□□□ -0.37
AtmQ62388 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.71□□□□□ -0.37
AtmQ62388 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.71□□□□□ -0.37
AtmQ62388 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
AtmQ62388 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.71□□□□□ -0.37
AtmQ62388 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
AtmQ62388 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AtmQ62388 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.71□□□□□ -0.38
AtmQ62388 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.71□□□□□ -0.38
AtmQ62388 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AtmQ62388 Gm8385-201ENSMUST00000058999 643 ntBASIC12.71□□□□□ -0.38
AtmQ62388 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
AtmQ62388 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.71□□□□□ -0.38
AtmQ62388 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
AtmQ62388 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
AtmQ62388 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
AtmQ62388 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.71□□□□□ -0.38
AtmQ62388 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Gm25214-201ENSMUST00000104573 129 ntBASIC12.7□□□□□ -0.38
AtmQ62388 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
AtmQ62388 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
AtmQ62388 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.7□□□□□ -0.38
AtmQ62388 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
AtmQ62388 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms