Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm23270-201ENSMUST00000104055 131 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm14208-201ENSMUST00000119645 678 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm14277-201ENSMUST00000121195 360 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm11978-201ENSMUST00000122315 466 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm19208-201ENSMUST00000213861 912 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Snord83b-201ENSMUST00000104546 94 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Gm13665-201ENSMUST00000120830 528 ntBASIC15.87■□□□□ 0.13
Scn9aQ62205 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.87■□□□□ 0.13
Scn9aQ62205 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.87■□□□□ 0.13
Scn9aQ62205 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scn9aQ62205 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Scn9aQ62205 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Mir7032-201ENSMUST00000185154 79 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Scn9aQ62205 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm13461-201ENSMUST00000120980 662 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.86■□□□□ 0.13
Scn9aQ62205 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn9aQ62205 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.86■□□□□ 0.13
Scn9aQ62205 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Gm8738-201ENSMUST00000172606 329 ntBASIC15.85■□□□□ 0.13
Scn9aQ62205 AA914427-201ENSMUST00000193194 1166 ntBASIC15.85■□□□□ 0.13
Scn9aQ62205 Gm31256-201ENSMUST00000194705 506 ntBASIC15.85■□□□□ 0.13
Scn9aQ62205 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn9aQ62205 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn9aQ62205 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms