Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Foxc1Q61572 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.26□□□□□ -0.77
Foxc1Q61572 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Foxc1Q61572 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.26□□□□□ -0.77
Foxc1Q61572 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Foxc1Q61572 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm5566-201ENSMUST00000116118 459 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm13255-201ENSMUST00000117255 547 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm6222-201ENSMUST00000120787 396 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm23547-201ENSMUST00000158210 271 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm9719-201ENSMUST00000162765 543 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm10275-202ENSMUST00000168697 495 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Mir8102-201ENSMUST00000184148 139 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm44146-201ENSMUST00000203508 816 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.25□□□□□ -0.77
Foxc1Q61572 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gm10275-201ENSMUST00000092620 635 ntBASIC10.25□□□□□ -0.77
Foxc1Q61572 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Foxc1Q61572 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Foxc1Q61572 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Matn2-206ENSMUST00000228570 2798 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm18944-201ENSMUST00000207672 643 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC10.24□□□□□ -0.77
Foxc1Q61572 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Foxc1Q61572 Gm6888-201ENSMUST00000221983 706 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.24□□□□□ -0.77
Foxc1Q61572 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms