Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ecm1Q61508 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.13■□□□□ 0.01
Ecm1Q61508 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.13■□□□□ 0.01
Ecm1Q61508 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ecm1Q61508 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.12■□□□□ 0.01
Ecm1Q61508 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 Olfr284-202ENSMUST00000206647 966 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 Gm18935-201ENSMUST00000212692 664 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.12■□□□□ 0.01
Ecm1Q61508 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ecm1Q61508 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ecm1Q61508 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.11■□□□□ 0.01
Ecm1Q61508 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.11■□□□□ 0.01
Ecm1Q61508 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm43758-201ENSMUST00000199500 367 ntBASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Gm24526-201ENSMUST00000082921 158 ntBASIC15.11■□□□□ 0.01
Ecm1Q61508 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ecm1Q61508 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ecm1Q61508 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Ecm1Q61508 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.1■□□□□ 0.01
Ecm1Q61508 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.1■□□□□ 0.01
Ecm1Q61508 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.1■□□□□ 0.01
Ecm1Q61508 Gm16379-201ENSMUST00000161469 348 ntBASIC15.1■□□□□ 0.01
Ecm1Q61508 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ecm1Q61508 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ecm1Q61508 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms