Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm15371-201ENSMUST00000117057 784 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm15429-201ENSMUST00000151268 798 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm17330-201ENSMUST00000221047 165 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.29□□□□□ -0.12
Smarcd1Q61466 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd1Q61466 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Gm13689-201ENSMUST00000119360 685 ntBASIC14.28□□□□□ -0.12
Smarcd1Q61466 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Gm38223-201ENSMUST00000194484 695 ntBASIC14.28□□□□□ -0.12
Smarcd1Q61466 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.28□□□□□ -0.12
Smarcd1Q61466 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.28□□□□□ -0.12
Smarcd1Q61466 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcd1Q61466 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.27□□□□□ -0.12
Smarcd1Q61466 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.27□□□□□ -0.12
Smarcd1Q61466 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcd1Q61466 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.27□□□□□ -0.13
Smarcd1Q61466 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcd1Q61466 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Gm6983-201ENSMUST00000214912 628 ntBASIC14.27□□□□□ -0.13
Smarcd1Q61466 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms