Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Mre11Q61216 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Mre11Q61216 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.46■□□□□ 0.23
Mre11Q61216 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Mre11Q61216 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Mre11Q61216 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.46■□□□□ 0.23
Mre11Q61216 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.46■□□□□ 0.23
Mre11Q61216 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mre11Q61216 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Mre11Q61216 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.46■□□□□ 0.22
Mre11Q61216 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Mre11Q61216 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Mre11Q61216 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mre11Q61216 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.45■□□□□ 0.22
Mre11Q61216 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Mre11Q61216 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Mre11Q61216 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Mre11Q61216 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Mre11Q61216 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC16.45■□□□□ 0.22
Mre11Q61216 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Gm24589-201ENSMUST00000116692 94 ntBASIC16.45■□□□□ 0.22
Mre11Q61216 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.45■□□□□ 0.22
Mre11Q61216 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.45■□□□□ 0.22
Mre11Q61216 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.45■□□□□ 0.22
Mre11Q61216 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Mre11Q61216 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.45■□□□□ 0.22
Mre11Q61216 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mre11Q61216 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Mre11Q61216 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Mre11Q61216 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Mre11Q61216 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.44■□□□□ 0.22
Mre11Q61216 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.44■□□□□ 0.22
Mre11Q61216 Gm34391-201ENSMUST00000203706 907 ntBASIC16.44■□□□□ 0.22
Mre11Q61216 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Mre11Q61216 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.44■□□□□ 0.22
Mre11Q61216 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mre11Q61216 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.44■□□□□ 0.22
Mre11Q61216 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Mre11Q61216 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Mre11Q61216 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Mre11Q61216 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.43■□□□□ 0.22
Mre11Q61216 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms