Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ClpbQ60649 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Gm15393-201ENSMUST00000120499 219 ntBASIC13.21□□□□□ -0.29
ClpbQ60649 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.21□□□□□ -0.29
ClpbQ60649 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Gm44608-201ENSMUST00000206827 855 ntBASIC13.21□□□□□ -0.29
ClpbQ60649 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.21□□□□□ -0.29
ClpbQ60649 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ClpbQ60649 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ClpbQ60649 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.2□□□□□ -0.3
ClpbQ60649 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gm12585-201ENSMUST00000117307 290 ntBASIC13.2□□□□□ -0.3
ClpbQ60649 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.2□□□□□ -0.3
ClpbQ60649 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.2□□□□□ -0.3
ClpbQ60649 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ClpbQ60649 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gm20445-201ENSMUST00000061905 565 ntBASIC13.2□□□□□ -0.3
ClpbQ60649 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ClpbQ60649 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ClpbQ60649 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ClpbQ60649 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ClpbQ60649 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.19□□□□□ -0.3
ClpbQ60649 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Gm15460-201ENSMUST00000118147 391 ntBASIC13.19□□□□□ -0.3
ClpbQ60649 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ClpbQ60649 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ClpbQ60649 Gm44855-201ENSMUST00000205725 362 ntBASIC13.19□□□□□ -0.3
ClpbQ60649 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.19□□□□□ -0.3
ClpbQ60649 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Syt7-205ENSMUST00000224135 1557 ntBASIC13.19□□□□□ -0.3
ClpbQ60649 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ClpbQ60649 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ClpbQ60649 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ClpbQ60649 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.19□□□□□ -0.3
ClpbQ60649 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms