Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Gm43703-201ENSMUST00000200523 763 ntBASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim38Q5SZ99 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.27□□□□□ -0.12
Trim38Q5SZ99 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gm24420-201ENSMUST00000176676 59 ntBASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gm38294-201ENSMUST00000192831 381 ntBASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim38Q5SZ99 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim38Q5SZ99 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim38Q5SZ99 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim38Q5SZ99 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim38Q5SZ99 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim38Q5SZ99 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms