Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shroom1Q5SX79 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm4984-201ENSMUST00000115987 360 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm8463-201ENSMUST00000208573 613 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.62□□□□□ -0.07
Shroom1Q5SX79 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shroom1Q5SX79 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Matn2-206ENSMUST00000228570 2798 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm43094-201ENSMUST00000196549 921 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.61□□□□□ -0.07
Shroom1Q5SX79 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm8927-201ENSMUST00000181978 981 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 AY702102-202ENSMUST00000194651 1173 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Gm3222-201ENSMUST00000071282 990 ntBASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shroom1Q5SX79 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms