Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Gm4875-201ENSMUST00000118257 786 ntBASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Gm27306-201ENSMUST00000183970 107 ntBASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf20Q5DTM8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf20Q5DTM8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Gm15920-201ENSMUST00000118998 402 ntBASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rnf20Q5DTM8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms