Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Urb1Q571H0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Urb1Q571H0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Urb1Q571H0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.65□□□□□ -0.38
Urb1Q571H0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm12882-201ENSMUST00000121696 517 ntBASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm4857-201ENSMUST00000192718 785 ntBASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm38341-201ENSMUST00000195357 515 ntBASIC12.65□□□□□ -0.38
Urb1Q571H0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Urb1Q571H0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Urb1Q571H0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Urb1Q571H0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Urb1Q571H0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Gm37466-201ENSMUST00000195692 652 ntBASIC12.64□□□□□ -0.39
Urb1Q571H0 Gm43822-201ENSMUST00000200285 476 ntBASIC12.64□□□□□ -0.39
Urb1Q571H0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Gm18473-201ENSMUST00000220543 868 ntBASIC12.64□□□□□ -0.39
Urb1Q571H0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.64□□□□□ -0.39
Urb1Q571H0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Gm7783-201ENSMUST00000204795 781 ntBASIC12.64□□□□□ -0.39
Urb1Q571H0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.64□□□□□ -0.39
Urb1Q571H0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Urb1Q571H0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms