Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm25700-201ENSMUST00000177693 110 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm5523-201ENSMUST00000180415 997 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm44262-201ENSMUST00000204969 372 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.69■□□□□ 0.26
Shank3Q4ACU6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Gm14109-201ENSMUST00000118814 309 ntBASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.68■□□□□ 0.26
Shank3Q4ACU6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.68■□□□□ 0.26
Shank3Q4ACU6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shank3Q4ACU6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm2546-201ENSMUST00000182630 991 ntBASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm27046-201ENSMUST00000182160 463 ntBASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm13097-201ENSMUST00000210722 397 ntBASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm8959-201ENSMUST00000213150 571 ntBASIC16.67■□□□□ 0.26
Shank3Q4ACU6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shank3Q4ACU6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Gm5950-201ENSMUST00000213337 772 ntBASIC16.66■□□□□ 0.26
Shank3Q4ACU6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shank3Q4ACU6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms