Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.74■□□□□ 0.11
Ckap2Q3V1H1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm5866-201ENSMUST00000177881 973 ntBASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ckap2Q3V1H1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12859-201ENSMUST00000117834 427 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12403-201ENSMUST00000121384 959 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm25925-201ENSMUST00000158314 306 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ckap2Q3V1H1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms