Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Mir1895-201ENSMUST00000122615 79 ntBASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shisa3Q3UPR0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm11745-201ENSMUST00000121669 448 ntBASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Chchd1-203ENSMUST00000224633 557 ntBASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shisa3Q3UPR0 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shisa3Q3UPR0 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms