Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm2810-201ENSMUST00000118681 990 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm6736-201ENSMUST00000166583 948 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Gm10275-202ENSMUST00000168697 495 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Gm27702-201ENSMUST00000184512 56 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Gm10275-201ENSMUST00000092620 635 ntBASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fndc4Q3TR08 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fndc4Q3TR08 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms