Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.1□□□□□ -0.31
Khdc4Q3TCX3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Khdc4Q3TCX3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Khdc4Q3TCX3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Gm8584-201ENSMUST00000171982 758 ntBASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Khdc4Q3TCX3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms