Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Syt7-205ENSMUST00000224135 1557 ntBASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm2451-201ENSMUST00000199447 999 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm10290-201ENSMUST00000200451 999 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccbe1Q3MI99 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Gm18733-201ENSMUST00000173950 856 ntBASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.41□□□□□ -0.42
Ccbe1Q3MI99 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms