Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm23699-201ENSMUST00000158835 135 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm18893-201ENSMUST00000198416 943 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm19163-201ENSMUST00000223313 780 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm11618-201ENSMUST00000117946 267 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm4768-201ENSMUST00000206199 686 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm19208-201ENSMUST00000213861 912 ntBASIC9.85□□□□□ -0.83
Hspg2Q05793 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.85□□□□□ -0.83
Hspg2Q05793 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Hspg2Q05793 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Mospd4-201ENSMUST00000180618 576 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm25517-201ENSMUST00000083865 134 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Matn2-206ENSMUST00000228570 2798 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm11637-201ENSMUST00000120601 592 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12616-201ENSMUST00000118594 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12624-201ENSMUST00000177615 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12621-201ENSMUST00000177760 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12615-201ENSMUST00000177970 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12622-201ENSMUST00000177975 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12627-201ENSMUST00000178412 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12625-201ENSMUST00000179122 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12614-201ENSMUST00000179586 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm12613-201ENSMUST00000180323 382 ntBASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hspg2Q05793 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
Hspg2Q05793 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm13047-201ENSMUST00000117116 815 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms