Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Npas1P97459 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.54□□□□□ -0.56
Npas1P97459 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Npas1P97459 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Npas1P97459 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Npas1P97459 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Gm13036-201ENSMUST00000117799 748 ntBASIC11.53□□□□□ -0.56
Npas1P97459 Gm16198-201ENSMUST00000118766 670 ntBASIC11.53□□□□□ -0.56
Npas1P97459 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.53□□□□□ -0.56
Npas1P97459 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.53□□□□□ -0.56
Npas1P97459 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.53□□□□□ -0.56
Npas1P97459 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.53□□□□□ -0.56
Npas1P97459 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Npas1P97459 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Npas1P97459 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Npas1P97459 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Npas1P97459 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Npas1P97459 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.52□□□□□ -0.57
Npas1P97459 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Gm16026-204ENSMUST00000162652 683 ntBASIC11.52□□□□□ -0.57
Npas1P97459 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Npas1P97459 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.52□□□□□ -0.57
Npas1P97459 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.52□□□□□ -0.57
Npas1P97459 Gm10060-201ENSMUST00000212002 111 ntBASIC11.52□□□□□ -0.57
Npas1P97459 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Npas1P97459 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.52□□□□□ -0.57
Npas1P97459 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Npas1P97459 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Npas1P97459 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms