Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trim43cP86449 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.94□□□□□ -0.02
Trim43cP86449 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim43cP86449 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim43cP86449 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim43cP86449 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim43cP86449 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Trim43cP86449 Gm5279-201ENSMUST00000199575 745 ntBASIC14.93□□□□□ -0.02
Trim43cP86449 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Trim43cP86449 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim43cP86449 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim43cP86449 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.92□□□□□ -0.02
Trim43cP86449 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim43cP86449 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.92□□□□□ -0.02
Trim43cP86449 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim43cP86449 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim43cP86449 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.92□□□□□ -0.02
Trim43cP86449 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim43cP86449 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trim43cP86449 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43cP86449 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim43cP86449 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim43cP86449 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms