Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Gm6415-201ENSMUST00000118488 348 ntBASIC14.17□□□□□ -0.14
Trim43bP86448 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim43bP86448 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43bP86448 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Trim43bP86448 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Gm14057-201ENSMUST00000120631 482 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 Gm10275-202ENSMUST00000168697 495 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Gm10275-201ENSMUST00000092620 635 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trim43bP86448 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Trim43bP86448 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.16□□□□□ -0.14
Trim43bP86448 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim43bP86448 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim43bP86448 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43bP86448 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.15□□□□□ -0.14
Trim43bP86448 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim43bP86448 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim43bP86448 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim43bP86448 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim43bP86448 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.15□□□□□ -0.14
Trim43bP86448 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.15□□□□□ -0.14
Trim43bP86448 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.15□□□□□ -0.14
Trim43bP86448 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trim43bP86448 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.15□□□□□ -0.14
Trim43bP86448 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim43bP86448 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim43bP86448 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim43bP86448 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43bP86448 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim43bP86448 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim43bP86448 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43bP86448 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms