Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.61□□□□□ -0.23
Crnkl1P63154 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Crnkl1P63154 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.61□□□□□ -0.23
Crnkl1P63154 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.61□□□□□ -0.23
Crnkl1P63154 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Crnkl1P63154 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.6□□□□□ -0.23
Crnkl1P63154 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.6□□□□□ -0.23
Crnkl1P63154 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.6□□□□□ -0.23
Crnkl1P63154 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Crnkl1P63154 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Crnkl1P63154 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.59□□□□□ -0.23
Crnkl1P63154 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Crnkl1P63154 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Crnkl1P63154 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Crnkl1P63154 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Crnkl1P63154 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms