Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lhx1P63006 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.49□□□□□ -0.25
Lhx1P63006 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lhx1P63006 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lhx1P63006 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lhx1P63006 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.48□□□□□ -0.25
Lhx1P63006 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lhx1P63006 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lhx1P63006 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.48□□□□□ -0.25
Lhx1P63006 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.48□□□□□ -0.25
Lhx1P63006 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.48□□□□□ -0.25
Lhx1P63006 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Gm15429-201ENSMUST00000151268 798 ntBASIC13.48□□□□□ -0.25
Lhx1P63006 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.48□□□□□ -0.25
Lhx1P63006 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lhx1P63006 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.48□□□□□ -0.25
Lhx1P63006 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Lhx1P63006 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.48□□□□□ -0.25
Lhx1P63006 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lhx1P63006 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.47□□□□□ -0.25
Lhx1P63006 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Lhx1P63006 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Lhx1P63006 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.47□□□□□ -0.25
Lhx1P63006 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx1P63006 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gm42550-201ENSMUST00000201553 960 ntBASIC13.47□□□□□ -0.25
Lhx1P63006 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.47□□□□□ -0.25
Lhx1P63006 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lhx1P63006 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lhx1P63006 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.47□□□□□ -0.25
Lhx1P63006 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lhx1P63006 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lhx1P63006 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lhx1P63006 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms