Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.21□□□□□ -0.45
Sf3b6P59708 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.21□□□□□ -0.45
Sf3b6P59708 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.21□□□□□ -0.45
Sf3b6P59708 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sf3b6P59708 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sf3b6P59708 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.21□□□□□ -0.46
Sf3b6P59708 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Sf3b6P59708 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sf3b6P59708 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.2□□□□□ -0.46
Sf3b6P59708 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.2□□□□□ -0.46
Sf3b6P59708 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Gm10175-201ENSMUST00000086013 645 ntBASIC12.2□□□□□ -0.46
Sf3b6P59708 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sf3b6P59708 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.2□□□□□ -0.46
Sf3b6P59708 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 Gm29741-201ENSMUST00000192667 421 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 Gm17968-201ENSMUST00000194902 784 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.19□□□□□ -0.46
Sf3b6P59708 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Gm5867-201ENSMUST00000063197 592 ntBASIC12.19□□□□□ -0.46
Sf3b6P59708 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms