Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm29109-201ENSMUST00000185895 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21896-201ENSMUST00000186520 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21873-201ENSMUST00000186728 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21794-201ENSMUST00000187056 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21880-201ENSMUST00000187275 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21826-201ENSMUST00000187451 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21198-201ENSMUST00000188393 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21749-201ENSMUST00000189343 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21901-201ENSMUST00000189568 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm29424-201ENSMUST00000189716 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm28599-201ENSMUST00000189838 694 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21867-201ENSMUST00000189917 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm29269-201ENSMUST00000190087 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21722-201ENSMUST00000190153 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm28423-201ENSMUST00000190701 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21899-201ENSMUST00000190745 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21910-201ENSMUST00000191163 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21849-201ENSMUST00000191571 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm28678-201ENSMUST00000191593 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm20910-201ENSMUST00000193268 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm21871-201ENSMUST00000194621 696 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.11□□□□□ -0.63
Sssca1P56873 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.11□□□□□ -0.63
Sssca1P56873 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sssca1P56873 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sssca1P56873 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sssca1P56873 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sssca1P56873 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sssca1P56873 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sssca1P56873 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sssca1P56873 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sssca1P56873 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 Gm11025-201ENSMUST00000140773 466 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.1□□□□□ -0.63
Sssca1P56873 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Mir8117-201ENSMUST00000184773 107 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 AA619741-201ENSMUST00000195095 646 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Sssca1P56873 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sssca1P56873 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.1□□□□□ -0.63
Sssca1P56873 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sssca1P56873 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sssca1P56873 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sssca1P56873 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sssca1P56873 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms