Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abcd3P55096 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abcd3P55096 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abcd3P55096 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Abcd3P55096 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abcd3P55096 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.32□□□□□ -0.44
Abcd3P55096 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Abcd3P55096 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Abcd3P55096 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Abcd3P55096 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.31□□□□□ -0.44
Abcd3P55096 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.31□□□□□ -0.44
Abcd3P55096 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.31□□□□□ -0.44
Abcd3P55096 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Abcd3P55096 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Abcd3P55096 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Abcd3P55096 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.3□□□□□ -0.44
Abcd3P55096 Gm7775-201ENSMUST00000218871 853 ntBASIC12.3□□□□□ -0.44
Abcd3P55096 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.3□□□□□ -0.44
Abcd3P55096 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.3□□□□□ -0.44
Abcd3P55096 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.3□□□□□ -0.44
Abcd3P55096 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Abcd3P55096 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Abcd3P55096 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.29□□□□□ -0.44
Abcd3P55096 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Abcd3P55096 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Abcd3P55096 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abcd3P55096 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abcd3P55096 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Abcd3P55096 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abcd3P55096 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Abcd3P55096 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms