Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Pdx1P52946 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.59□□□□□ -0.23
Pdx1P52946 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pdx1P52946 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Pdx1P52946 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.59□□□□□ -0.23
Pdx1P52946 Gm27437-201ENSMUST00000183429 107 ntBASIC13.59□□□□□ -0.23
Pdx1P52946 Mir6977-201ENSMUST00000184960 64 ntBASIC13.59□□□□□ -0.23
Pdx1P52946 Gm28760-201ENSMUST00000185995 736 ntBASIC13.59□□□□□ -0.23
Pdx1P52946 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.59□□□□□ -0.23
Pdx1P52946 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pdx1P52946 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pdx1P52946 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.59□□□□□ -0.23
Pdx1P52946 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pdx1P52946 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.58□□□□□ -0.23
Pdx1P52946 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Syt7-205ENSMUST00000224135 1557 ntBASIC13.58□□□□□ -0.23
Pdx1P52946 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pdx1P52946 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pdx1P52946 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.58□□□□□ -0.24
Pdx1P52946 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.58□□□□□ -0.24
Pdx1P52946 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pdx1P52946 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Pdx1P52946 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pdx1P52946 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.58□□□□□ -0.24
Pdx1P52946 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.58□□□□□ -0.24
Pdx1P52946 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Pdx1P52946 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Pdx1P52946 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.58□□□□□ -0.24
Pdx1P52946 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Pdx1P52946 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pdx1P52946 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pdx1P52946 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdx1P52946 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdx1P52946 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdx1P52946 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.57□□□□□ -0.24
Pdx1P52946 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pdx1P52946 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pdx1P52946 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms