Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RoraP51448 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.02□□□□□ -0.33
RoraP51448 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
RoraP51448 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RoraP51448 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.01□□□□□ -0.33
RoraP51448 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.01□□□□□ -0.33
RoraP51448 Gm24420-201ENSMUST00000176676 59 ntBASIC13.01□□□□□ -0.33
RoraP51448 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Gm8602-201ENSMUST00000184045 607 ntBASIC13.01□□□□□ -0.33
RoraP51448 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RoraP51448 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RoraP51448 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.01□□□□□ -0.33
RoraP51448 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.01□□□□□ -0.33
RoraP51448 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RoraP51448 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RoraP51448 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RoraP51448 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RoraP51448 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13□□□□□ -0.33
RoraP51448 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
RoraP51448 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13□□□□□ -0.33
RoraP51448 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13□□□□□ -0.33
RoraP51448 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13□□□□□ -0.33
RoraP51448 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13□□□□□ -0.33
RoraP51448 Gm19078-201ENSMUST00000206311 727 ntBASIC13□□□□□ -0.33
RoraP51448 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RoraP51448 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13□□□□□ -0.33
RoraP51448 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Cdk7-205ENSMUST00000225990 1159 ntBASIC13□□□□□ -0.33
RoraP51448 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13□□□□□ -0.33
RoraP51448 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Mir497b-201ENSMUST00000093601 125 ntBASIC13□□□□□ -0.33
RoraP51448 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RoraP51448 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
RoraP51448 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13□□□□□ -0.33
RoraP51448 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms