Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Brca1P48754 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.14■□□□□ 0.01
Brca1P48754 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.14■□□□□ 0.01
Brca1P48754 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.14■□□□□ 0.01
Brca1P48754 Gm19163-201ENSMUST00000223313 780 ntBASIC15.14■□□□□ 0.01
Brca1P48754 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Brca1P48754 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Brca1P48754 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.14■□□□□ 0.01
Brca1P48754 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.14■□□□□ 0.01
Brca1P48754 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Brca1P48754 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Gm25214-201ENSMUST00000104573 129 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.13■□□□□ 0.01
Brca1P48754 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.13■□□□□ 0.01
Brca1P48754 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.13■□□□□ 0.01
Brca1P48754 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Gm8099-201ENSMUST00000200510 742 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.13■□□□□ 0.01
Brca1P48754 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.13■□□□□ 0.01
Brca1P48754 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.13■□□□□ 0.01
Brca1P48754 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Brca1P48754 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.13■□□□□ 0.01
Brca1P48754 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Brca1P48754 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Brca1P48754 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Gm23270-201ENSMUST00000104055 131 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Gm13570-201ENSMUST00000140763 309 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Gm15276-201ENSMUST00000145953 498 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.13■□□□□ 0.01
Brca1P48754 Gm18584-201ENSMUST00000203098 964 ntBASIC15.13■□□□□ 0.01
Brca1P48754 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Brca1P48754 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.13■□□□□ 0.01
Brca1P48754 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Brca1P48754 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.12■□□□□ 0.01
Brca1P48754 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Brca1P48754 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Gm23200-201ENSMUST00000104379 132 ntBASIC15.12■□□□□ 0.01
Brca1P48754 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Gm11331-201ENSMUST00000119764 288 ntBASIC15.12■□□□□ 0.01
Brca1P48754 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.12■□□□□ 0.01
Brca1P48754 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Brca1P48754 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Brca1P48754 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Brca1P48754 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Brca1P48754 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Brca1P48754 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.11■□□□□ 0.01
Brca1P48754 AU022133-201ENSMUST00000200601 873 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms