Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GdnfP48540 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GdnfP48540 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GdnfP48540 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.07□□□□□ -0.48
GdnfP48540 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.07□□□□□ -0.48
GdnfP48540 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.07□□□□□ -0.48
GdnfP48540 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.07□□□□□ -0.48
GdnfP48540 Gm37935-201ENSMUST00000192012 982 ntBASIC12.07□□□□□ -0.48
GdnfP48540 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Gm45098-201ENSMUST00000207179 657 ntBASIC12.07□□□□□ -0.48
GdnfP48540 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.07□□□□□ -0.48
GdnfP48540 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GdnfP48540 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
GdnfP48540 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
GdnfP48540 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
GdnfP48540 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.07□□□□□ -0.48
GdnfP48540 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
GdnfP48540 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
GdnfP48540 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.06□□□□□ -0.48
GdnfP48540 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.06□□□□□ -0.48
GdnfP48540 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Rprl2-201ENSMUST00000157150 290 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
GdnfP48540 Gm18889-201ENSMUST00000174284 929 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.06□□□□□ -0.48
GdnfP48540 Gm28196-201ENSMUST00000187719 640 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Gm37230-201ENSMUST00000194491 818 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.06□□□□□ -0.48
GdnfP48540 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.06□□□□□ -0.48
GdnfP48540 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
GdnfP48540 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
GdnfP48540 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms