Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-6P43688 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-6P43688 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nkx2-6P43688 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13□□□□□ -0.33
Nkx2-6P43688 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13□□□□□ -0.33
Nkx2-6P43688 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm37015-201ENSMUST00000192763 1521 ntBASIC13□□□□□ -0.33
Nkx2-6P43688 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm13859-201ENSMUST00000119936 1423 ntBASIC13□□□□□ -0.33
Nkx2-6P43688 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-6P43688 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm12390-201ENSMUST00000117897 397 ntBASIC13□□□□□ -0.33
Nkx2-6P43688 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-6P43688 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13□□□□□ -0.33
Nkx2-6P43688 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nkx2-6P43688 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-6P43688 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm12928-201ENSMUST00000117115 573 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm15376-201ENSMUST00000122258 783 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm6983-201ENSMUST00000214912 628 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.99□□□□□ -0.33
Nkx2-6P43688 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-6P43688 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.98□□□□□ -0.33
Nkx2-6P43688 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Mir1982-201ENSMUST00000157368 74 ntBASIC12.98□□□□□ -0.33
Nkx2-6P43688 Mir1938-201ENSMUST00000158746 100 ntBASIC12.98□□□□□ -0.33
Nkx2-6P43688 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-6P43688 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms