Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.33□□□□□ -0.6
Cdkn1aP39689 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gm15429-201ENSMUST00000151268 798 ntBASIC11.33□□□□□ -0.6
Cdkn1aP39689 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gm9002-201ENSMUST00000178437 499 ntBASIC11.33□□□□□ -0.6
Cdkn1aP39689 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.33□□□□□ -0.6
Cdkn1aP39689 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdkn1aP39689 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.32□□□□□ -0.6
Cdkn1aP39689 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Gm5356-201ENSMUST00000093326 615 ntBASIC11.32□□□□□ -0.6
Cdkn1aP39689 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkn1aP39689 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms