Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.11□□□□□ -0.47
Cd28P31041 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.11□□□□□ -0.47
Cd28P31041 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.11□□□□□ -0.47
Cd28P31041 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd28P31041 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Mir5131-201ENSMUST00000175426 93 ntBASIC12.11□□□□□ -0.47
Cd28P31041 Gm7461-201ENSMUST00000058918 827 ntBASIC12.11□□□□□ -0.47
Cd28P31041 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cd28P31041 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.11□□□□□ -0.47
Cd28P31041 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cd28P31041 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cd28P31041 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd28P31041 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.1□□□□□ -0.47
Cd28P31041 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cd28P31041 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cd28P31041 Gm15957-201ENSMUST00000118893 974 ntBASIC12.1□□□□□ -0.47
Cd28P31041 Gm9103-201ENSMUST00000119371 405 ntBASIC12.1□□□□□ -0.47
Cd28P31041 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.1□□□□□ -0.47
Cd28P31041 Gm44608-201ENSMUST00000206827 855 ntBASIC12.1□□□□□ -0.47
Cd28P31041 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.1□□□□□ -0.47
Cd28P31041 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.1□□□□□ -0.47
Cd28P31041 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cd28P31041 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cd28P31041 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd28P31041 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
Cd28P31041 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd28P31041 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.09□□□□□ -0.47
Cd28P31041 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd28P31041 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd28P31041 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd28P31041 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cd28P31041 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cd28P31041 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd28P31041 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Cd28P31041 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd28P31041 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.08□□□□□ -0.48
Cd28P31041 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd28P31041 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.08□□□□□ -0.48
Cd28P31041 Gm13884-201ENSMUST00000118103 829 ntBASIC12.08□□□□□ -0.48
Cd28P31041 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms