Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.72■□□□□ 0.11
Vcam1P29533 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.72■□□□□ 0.11
Vcam1P29533 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Vcam1P29533 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vcam1P29533 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vcam1P29533 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.71■□□□□ 0.11
Vcam1P29533 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.71■□□□□ 0.11
Vcam1P29533 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm15198-201ENSMUST00000117283 177 ntBASIC15.71■□□□□ 0.11
Vcam1P29533 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm37922-201ENSMUST00000195596 455 ntBASIC15.71■□□□□ 0.11
Vcam1P29533 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.71■□□□□ 0.11
Vcam1P29533 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.71■□□□□ 0.11
Vcam1P29533 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vcam1P29533 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vcam1P29533 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vcam1P29533 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.71■□□□□ 0.1
Vcam1P29533 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vcam1P29533 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vcam1P29533 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Vcam1P29533 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vcam1P29533 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.7■□□□□ 0.1
Vcam1P29533 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcam1P29533 Gm7029-201ENSMUST00000173226 450 ntBASIC15.7■□□□□ 0.1
Vcam1P29533 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.7■□□□□ 0.1
Vcam1P29533 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.7■□□□□ 0.1
Vcam1P29533 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Vcam1P29533 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Vcam1P29533 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcam1P29533 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vcam1P29533 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vcam1P29533 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm22018-201ENSMUST00000104357 131 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm11618-201ENSMUST00000117946 267 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.69■□□□□ 0.1
Vcam1P29533 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.69■□□□□ 0.1
Vcam1P29533 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm19309-201ENSMUST00000218295 205 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vcam1P29533 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcam1P29533 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.69■□□□□ 0.1
Vcam1P29533 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms