Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.74□□□□□ -0.69
Ccl6P27784 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccl6P27784 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.73□□□□□ -0.69
Ccl6P27784 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Ccl6P27784 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccl6P27784 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccl6P27784 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.73□□□□□ -0.69
Ccl6P27784 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.73□□□□□ -0.69
Ccl6P27784 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.73□□□□□ -0.69
Ccl6P27784 Gm44608-201ENSMUST00000206827 855 ntBASIC10.73□□□□□ -0.69
Ccl6P27784 Gm18027-201ENSMUST00000218947 619 ntBASIC10.73□□□□□ -0.69
Ccl6P27784 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.73□□□□□ -0.69
Ccl6P27784 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccl6P27784 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccl6P27784 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ccl6P27784 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.72□□□□□ -0.69
Ccl6P27784 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ccl6P27784 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ccl6P27784 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Gm33320-201ENSMUST00000192232 530 ntBASIC10.72□□□□□ -0.69
Ccl6P27784 Gm37714-201ENSMUST00000194742 342 ntBASIC10.72□□□□□ -0.69
Ccl6P27784 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.72□□□□□ -0.69
Ccl6P27784 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ccl6P27784 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ccl6P27784 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ccl6P27784 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms