Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.98□□□□□ -0.33
TP20293 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.98□□□□□ -0.33
TP20293 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.98□□□□□ -0.33
TP20293 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.98□□□□□ -0.33
TP20293 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.98□□□□□ -0.33
TP20293 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.98□□□□□ -0.33
TP20293 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TP20293 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.98□□□□□ -0.33
TP20293 Gm46209-201ENSMUST00000217912 553 ntBASIC12.98□□□□□ -0.33
TP20293 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.98□□□□□ -0.33
TP20293 Gm9063-201ENSMUST00000223299 582 ntBASIC12.98□□□□□ -0.33
TP20293 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.98□□□□□ -0.33
TP20293 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TP20293 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.98□□□□□ -0.33
TP20293 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.98□□□□□ -0.33
TP20293 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TP20293 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TP20293 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TP20293 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.97□□□□□ -0.33
TP20293 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.97□□□□□ -0.33
TP20293 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Gm3436-201ENSMUST00000179930 840 ntBASIC12.97□□□□□ -0.33
TP20293 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TP20293 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.97□□□□□ -0.33
TP20293 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TP20293 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.97□□□□□ -0.33
TP20293 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
TP20293 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TP20293 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TP20293 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TP20293 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.96□□□□□ -0.33
TP20293 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.96□□□□□ -0.33
TP20293 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Gm8584-201ENSMUST00000171982 758 ntBASIC12.96□□□□□ -0.33
TP20293 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TP20293 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.96□□□□□ -0.33
TP20293 Gm33320-201ENSMUST00000192232 530 ntBASIC12.96□□□□□ -0.33
TP20293 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms